robust rank aggregation method in R
I'm currently on a placement of a biomedical science degree, attempting to conduct a meta analysis of microRNA gene expression data. I have been asked by my lecturer to complete this using the robust rank aggregation method.
I have installed the relevant package into R ( https://cran.r-project.org/web/packages/RobustRankAggreg/index.html) and have all of the data ( fold change gene expression and p value for each microRNA) that I need from the articles, I'm just not sure what format the data needs to be in ( ie. whether I input the data into R as one collective csv file etc) and then how I would go about performing the analysis.
Apologies in advance if this is simple, have only just started using R and as such I don't really know what I'm doing.
Any help would be greatly appreciated
Thanks, Ben.
r
asked Nov 20 '18 at 10:11
Ben MurphyBen Murphy
1
add a comment |
I'm currently on a placement of a biomedical science degree, attempting to conduct a meta analysis of microRNA gene expression data. I have been asked by my lecturer to complete this using the robust rank aggregation method.
I have installed the relevant package into R ( https://cran.r-project.org/web/packages/RobustRankAggreg/index.html) and have all of the data ( fold change gene expression and p value for each microRNA) that I need from the articles, I'm just not sure what format the data needs to be in ( ie. whether I input the data into R as one collective csv file etc) and then how I would go about performing the analysis.
Apologies in advance if this is simple, have only just started using R and as such I don't really know what I'm doing.
Any help would be greatly appreciated
Thanks, Ben.
r
asked Nov 20 '18 at 10:11
Ben MurphyBen Murphy
1
2
Welcome to SO! Please read How to Ask and give a Minimal, Complete, and Verifiable example in your question!
– jogo
Nov 20 '18 at 10:18
add a comment |
I'm currently on a placement of a biomedical science degree, attempting to conduct a meta analysis of microRNA gene expression data. I have been asked by my lecturer to complete this using the robust rank aggregation method.
I have installed the relevant package into R ( https://cran.r-project.org/web/packages/RobustRankAggreg/index.html) and have all of the data ( fold change gene expression and p value for each microRNA) that I need from the articles, I'm just not sure what format the data needs to be in ( ie. whether I input the data into R as one collective csv file etc) and then how I would go about performing the analysis.
Apologies in advance if this is simple, have only just started using R and as such I don't really know what I'm doing.
Any help would be greatly appreciated
Thanks, Ben.
r
asked Nov 20 '18 at 10:11
Ben MurphyBen Murphy
1
I'm currently on a placement of a biomedical science degree, attempting to conduct a meta analysis of microRNA gene expression data. I have been asked by my lecturer to complete this using the robust rank aggregation method.
I have installed the relevant package into R ( https://cran.r-project.org/web/packages/RobustRankAggreg/index.html) and have all of the data ( fold change gene expression and p value for each microRNA) that I need from the articles, I'm just not sure what format the data needs to be in ( ie. whether I input the data into R as one collective csv file etc) and then how I would go about performing the analysis.
Apologies in advance if this is simple, have only just started using R and as such I don't really know what I'm doing.
Any help would be greatly appreciated
Thanks, Ben.
r
r
asked Nov 20 '18 at 10:11
Ben MurphyBen Murphy
1
asked Nov 20 '18 at 10:11
Ben MurphyBen Murphy
1
asked Nov 20 '18 at 10:11
Ben MurphyBen Murphy
1
asked Nov 20 '18 at 10:11
Ben MurphyBen Murphy
1
asked Nov 20 '18 at 10:11
Ben MurphyBen Murphy
1
1
2
Welcome to SO! Please read How to Ask and give a Minimal, Complete, and Verifiable example in your question!
– jogo
Nov 20 '18 at 10:18
add a comment |
2
Welcome to SO! Please read How to Ask and give a Minimal, Complete, and Verifiable example in your question!
– jogo
Nov 20 '18 at 10:18
2
2
Welcome to SO! Please read How to Ask and give a Minimal, Complete, and Verifiable example in your question!
– jogo
Nov 20 '18 at 10:18
Welcome to SO! Please read How to Ask and give a Minimal, Complete, and Verifiable example in your question!
– jogo
Nov 20 '18 at 10:18
add a comment |
1 Answer
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You should first read the package vignette/manual to have some examples and at least get familiar with the most used ways to import data into R. Then maybe you can give a more hands on example.
answered Jan 3 at 12:20
MariusMarius
3791520
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1 Answer
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You should first read the package vignette/manual to have some examples and at least get familiar with the most used ways to import data into R. Then maybe you can give a more hands on example.
answered Jan 3 at 12:20
MariusMarius
3791520
add a comment |
You should first read the package vignette/manual to have some examples and at least get familiar with the most used ways to import data into R. Then maybe you can give a more hands on example.
answered Jan 3 at 12:20
MariusMarius
3791520
add a comment |
You should first read the package vignette/manual to have some examples and at least get familiar with the most used ways to import data into R. Then maybe you can give a more hands on example.
answered Jan 3 at 12:20
MariusMarius
3791520
You should first read the package vignette/manual to have some examples and at least get familiar with the most used ways to import data into R. Then maybe you can give a more hands on example.
answered Jan 3 at 12:20
MariusMarius
3791520
answered Jan 3 at 12:20
MariusMarius
3791520
answered Jan 3 at 12:20
MariusMarius
3791520
answered Jan 3 at 12:20
MariusMarius
3791520
3791520
add a comment |
add a comment |
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Welcome to SO! Please read How to Ask and give a Minimal, Complete, and Verifiable example in your question!
– jogo
Nov 20 '18 at 10:18