How to find Top features from Naive Bayes using sklearn pipeline











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How to find Top features from Naive Bayes using sklearn pipeline



Hi all,



I am trying to apply Naive Bayes(MultinomialNB ) using pipelines and i came up with the code. However I am interested in finding top 10 positve and negative words , but not able to succeed. when I searched , I got the code for finding top features which i mentioned below. However when i tried using the code using pipeline i am getting the error which i mentioned below. I tried searching exhaustively , but got the code without using pipeline.But when i use the code with my output from pipeline, it is not working. COuld you please help me on how to find feature importance from pipeline output.



    # Pipeline dictionary
pipelines = {
'bow_MultinomialNB' : make_pipeline(
CountVectorizer(),
preprocessing.Normalizer(),
MultinomialNB()
)
}


# List tuneable hyperparameters of our pipeline
pipelines['bow_MultinomialNB'].get_params()


# BOW - MultinomialNB hyperparameters
bow_MultinomialNB_hyperparameters = {
'multinomialnb__alpha' : [1000,500,100,50,10,5,1,0.5,0.1,0.05,0.01,0.005,0.001,0.0005,0.0001]
}

# Create hyperparameters dictionary
hyperparameters = {
'bow_MultinomialNB' : bow_MultinomialNB_hyperparameters
}


tscv = TimeSeriesSplit(n_splits=3) #For time based splitting
for name, pipeline in pipelines.items():
print("NAME:",name)
print("PIPELINE:",pipeline)


%time
# Create empty dictionary called fitted_models
fitted_models = {}

# Loop through model pipelines, tuning each one and saving it to fitted_models
for name, pipeline in pipelines.items():
# Create cross-validation object from pipeline and hyperparameters

model = GridSearchCV(pipeline, hyperparameters[name], cv=tscv, n_jobs=1,verbose=1)


# Fit model on X_train, y_train

model.fit(X_train, y_train)


# Store model in fitted_models[name]

fitted_models[name] = model


# Print '{name} has been fitted'
print(name, 'has been fitted.')


FEAURE IMPORTANCE:-



        pipelines['bow_MultinomialNB'].steps[2][1].classes__

---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
<ipython-input-125-7d45b007e86b> in <module>()
----> 1 pipelines['bow_MultinomialNB'].steps[2][1].classes_

AttributeError: 'MultinomialNB' object has no attribute 'classes_'


pipelines['bow_MultinomialNB'].steps[0][1].get_feature_names()
---------------------------------------------------------------------------
NotFittedError Traceback (most recent call last)
<ipython-input-126-2883929221d1> in <module>()
----> 1 pipelines['bow_MultinomialNB'].steps[0][1].get_feature_names()

~Anaconda3libsite-packagessklearnfeature_extractiontext.py in get_feature_names(self)
958 def get_feature_names(self):
959 """Array mapping from feature integer indices to feature name"""
--> 960 self._check_vocabulary()
961
962 return [t for t, i in sorted(six.iteritems(self.vocabulary_),

~Anaconda3libsite-packagessklearnfeature_extractiontext.py in _check_vocabulary(self)
301 """Check if vocabulary is empty or missing (not fit-ed)"""
302 msg = "%(name)s - Vocabulary wasn't fitted."
--> 303 check_is_fitted(self, 'vocabulary_', msg=msg),
304
305 if len(self.vocabulary_) == 0:

~Anaconda3libsite-packagessklearnutilsvalidation.py in check_is_fitted(estimator, attributes, msg, all_or_any)
766
767 if not all_or_any([hasattr(estimator, attr) for attr in attributes]):
--> 768 raise NotFittedError(msg % {'name': type(estimator).__name__})
769
770

NotFittedError: CountVectorizer - Vocabulary wasn't fitted.


x=pipelines['bow_MultinomialNB'].steps[0][1]._validate_vocabulary()
x.get_feature_names()

---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
<ipython-input-120-f620c754a34e> in <module>()
----> 1 x.get_feature_names()

AttributeError: 'NoneType' object has no attribute 'get_feature_names'


Regards,
Shree










share|improve this question




















  • 1




    Is there a reason you're looking at the pipelines object instead of the fitted model?
    – Jarad
    Nov 12 at 3:38










  • Either way it did not work. Actually I am saving each fitted model as per following code. fitted_models[name] = model. I am just interested in getting to work those error lines
    – premgnc1983
    Nov 12 at 12:46















up vote
0
down vote

favorite












How to find Top features from Naive Bayes using sklearn pipeline



Hi all,



I am trying to apply Naive Bayes(MultinomialNB ) using pipelines and i came up with the code. However I am interested in finding top 10 positve and negative words , but not able to succeed. when I searched , I got the code for finding top features which i mentioned below. However when i tried using the code using pipeline i am getting the error which i mentioned below. I tried searching exhaustively , but got the code without using pipeline.But when i use the code with my output from pipeline, it is not working. COuld you please help me on how to find feature importance from pipeline output.



    # Pipeline dictionary
pipelines = {
'bow_MultinomialNB' : make_pipeline(
CountVectorizer(),
preprocessing.Normalizer(),
MultinomialNB()
)
}


# List tuneable hyperparameters of our pipeline
pipelines['bow_MultinomialNB'].get_params()


# BOW - MultinomialNB hyperparameters
bow_MultinomialNB_hyperparameters = {
'multinomialnb__alpha' : [1000,500,100,50,10,5,1,0.5,0.1,0.05,0.01,0.005,0.001,0.0005,0.0001]
}

# Create hyperparameters dictionary
hyperparameters = {
'bow_MultinomialNB' : bow_MultinomialNB_hyperparameters
}


tscv = TimeSeriesSplit(n_splits=3) #For time based splitting
for name, pipeline in pipelines.items():
print("NAME:",name)
print("PIPELINE:",pipeline)


%time
# Create empty dictionary called fitted_models
fitted_models = {}

# Loop through model pipelines, tuning each one and saving it to fitted_models
for name, pipeline in pipelines.items():
# Create cross-validation object from pipeline and hyperparameters

model = GridSearchCV(pipeline, hyperparameters[name], cv=tscv, n_jobs=1,verbose=1)


# Fit model on X_train, y_train

model.fit(X_train, y_train)


# Store model in fitted_models[name]

fitted_models[name] = model


# Print '{name} has been fitted'
print(name, 'has been fitted.')


FEAURE IMPORTANCE:-



        pipelines['bow_MultinomialNB'].steps[2][1].classes__

---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
<ipython-input-125-7d45b007e86b> in <module>()
----> 1 pipelines['bow_MultinomialNB'].steps[2][1].classes_

AttributeError: 'MultinomialNB' object has no attribute 'classes_'


pipelines['bow_MultinomialNB'].steps[0][1].get_feature_names()
---------------------------------------------------------------------------
NotFittedError Traceback (most recent call last)
<ipython-input-126-2883929221d1> in <module>()
----> 1 pipelines['bow_MultinomialNB'].steps[0][1].get_feature_names()

~Anaconda3libsite-packagessklearnfeature_extractiontext.py in get_feature_names(self)
958 def get_feature_names(self):
959 """Array mapping from feature integer indices to feature name"""
--> 960 self._check_vocabulary()
961
962 return [t for t, i in sorted(six.iteritems(self.vocabulary_),

~Anaconda3libsite-packagessklearnfeature_extractiontext.py in _check_vocabulary(self)
301 """Check if vocabulary is empty or missing (not fit-ed)"""
302 msg = "%(name)s - Vocabulary wasn't fitted."
--> 303 check_is_fitted(self, 'vocabulary_', msg=msg),
304
305 if len(self.vocabulary_) == 0:

~Anaconda3libsite-packagessklearnutilsvalidation.py in check_is_fitted(estimator, attributes, msg, all_or_any)
766
767 if not all_or_any([hasattr(estimator, attr) for attr in attributes]):
--> 768 raise NotFittedError(msg % {'name': type(estimator).__name__})
769
770

NotFittedError: CountVectorizer - Vocabulary wasn't fitted.


x=pipelines['bow_MultinomialNB'].steps[0][1]._validate_vocabulary()
x.get_feature_names()

---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
<ipython-input-120-f620c754a34e> in <module>()
----> 1 x.get_feature_names()

AttributeError: 'NoneType' object has no attribute 'get_feature_names'


Regards,
Shree










share|improve this question




















  • 1




    Is there a reason you're looking at the pipelines object instead of the fitted model?
    – Jarad
    Nov 12 at 3:38










  • Either way it did not work. Actually I am saving each fitted model as per following code. fitted_models[name] = model. I am just interested in getting to work those error lines
    – premgnc1983
    Nov 12 at 12:46













up vote
0
down vote

favorite









up vote
0
down vote

favorite











How to find Top features from Naive Bayes using sklearn pipeline



Hi all,



I am trying to apply Naive Bayes(MultinomialNB ) using pipelines and i came up with the code. However I am interested in finding top 10 positve and negative words , but not able to succeed. when I searched , I got the code for finding top features which i mentioned below. However when i tried using the code using pipeline i am getting the error which i mentioned below. I tried searching exhaustively , but got the code without using pipeline.But when i use the code with my output from pipeline, it is not working. COuld you please help me on how to find feature importance from pipeline output.



    # Pipeline dictionary
pipelines = {
'bow_MultinomialNB' : make_pipeline(
CountVectorizer(),
preprocessing.Normalizer(),
MultinomialNB()
)
}


# List tuneable hyperparameters of our pipeline
pipelines['bow_MultinomialNB'].get_params()


# BOW - MultinomialNB hyperparameters
bow_MultinomialNB_hyperparameters = {
'multinomialnb__alpha' : [1000,500,100,50,10,5,1,0.5,0.1,0.05,0.01,0.005,0.001,0.0005,0.0001]
}

# Create hyperparameters dictionary
hyperparameters = {
'bow_MultinomialNB' : bow_MultinomialNB_hyperparameters
}


tscv = TimeSeriesSplit(n_splits=3) #For time based splitting
for name, pipeline in pipelines.items():
print("NAME:",name)
print("PIPELINE:",pipeline)


%time
# Create empty dictionary called fitted_models
fitted_models = {}

# Loop through model pipelines, tuning each one and saving it to fitted_models
for name, pipeline in pipelines.items():
# Create cross-validation object from pipeline and hyperparameters

model = GridSearchCV(pipeline, hyperparameters[name], cv=tscv, n_jobs=1,verbose=1)


# Fit model on X_train, y_train

model.fit(X_train, y_train)


# Store model in fitted_models[name]

fitted_models[name] = model


# Print '{name} has been fitted'
print(name, 'has been fitted.')


FEAURE IMPORTANCE:-



        pipelines['bow_MultinomialNB'].steps[2][1].classes__

---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
<ipython-input-125-7d45b007e86b> in <module>()
----> 1 pipelines['bow_MultinomialNB'].steps[2][1].classes_

AttributeError: 'MultinomialNB' object has no attribute 'classes_'


pipelines['bow_MultinomialNB'].steps[0][1].get_feature_names()
---------------------------------------------------------------------------
NotFittedError Traceback (most recent call last)
<ipython-input-126-2883929221d1> in <module>()
----> 1 pipelines['bow_MultinomialNB'].steps[0][1].get_feature_names()

~Anaconda3libsite-packagessklearnfeature_extractiontext.py in get_feature_names(self)
958 def get_feature_names(self):
959 """Array mapping from feature integer indices to feature name"""
--> 960 self._check_vocabulary()
961
962 return [t for t, i in sorted(six.iteritems(self.vocabulary_),

~Anaconda3libsite-packagessklearnfeature_extractiontext.py in _check_vocabulary(self)
301 """Check if vocabulary is empty or missing (not fit-ed)"""
302 msg = "%(name)s - Vocabulary wasn't fitted."
--> 303 check_is_fitted(self, 'vocabulary_', msg=msg),
304
305 if len(self.vocabulary_) == 0:

~Anaconda3libsite-packagessklearnutilsvalidation.py in check_is_fitted(estimator, attributes, msg, all_or_any)
766
767 if not all_or_any([hasattr(estimator, attr) for attr in attributes]):
--> 768 raise NotFittedError(msg % {'name': type(estimator).__name__})
769
770

NotFittedError: CountVectorizer - Vocabulary wasn't fitted.


x=pipelines['bow_MultinomialNB'].steps[0][1]._validate_vocabulary()
x.get_feature_names()

---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
<ipython-input-120-f620c754a34e> in <module>()
----> 1 x.get_feature_names()

AttributeError: 'NoneType' object has no attribute 'get_feature_names'


Regards,
Shree










share|improve this question















How to find Top features from Naive Bayes using sklearn pipeline



Hi all,



I am trying to apply Naive Bayes(MultinomialNB ) using pipelines and i came up with the code. However I am interested in finding top 10 positve and negative words , but not able to succeed. when I searched , I got the code for finding top features which i mentioned below. However when i tried using the code using pipeline i am getting the error which i mentioned below. I tried searching exhaustively , but got the code without using pipeline.But when i use the code with my output from pipeline, it is not working. COuld you please help me on how to find feature importance from pipeline output.



    # Pipeline dictionary
pipelines = {
'bow_MultinomialNB' : make_pipeline(
CountVectorizer(),
preprocessing.Normalizer(),
MultinomialNB()
)
}


# List tuneable hyperparameters of our pipeline
pipelines['bow_MultinomialNB'].get_params()


# BOW - MultinomialNB hyperparameters
bow_MultinomialNB_hyperparameters = {
'multinomialnb__alpha' : [1000,500,100,50,10,5,1,0.5,0.1,0.05,0.01,0.005,0.001,0.0005,0.0001]
}

# Create hyperparameters dictionary
hyperparameters = {
'bow_MultinomialNB' : bow_MultinomialNB_hyperparameters
}


tscv = TimeSeriesSplit(n_splits=3) #For time based splitting
for name, pipeline in pipelines.items():
print("NAME:",name)
print("PIPELINE:",pipeline)


%time
# Create empty dictionary called fitted_models
fitted_models = {}

# Loop through model pipelines, tuning each one and saving it to fitted_models
for name, pipeline in pipelines.items():
# Create cross-validation object from pipeline and hyperparameters

model = GridSearchCV(pipeline, hyperparameters[name], cv=tscv, n_jobs=1,verbose=1)


# Fit model on X_train, y_train

model.fit(X_train, y_train)


# Store model in fitted_models[name]

fitted_models[name] = model


# Print '{name} has been fitted'
print(name, 'has been fitted.')


FEAURE IMPORTANCE:-



        pipelines['bow_MultinomialNB'].steps[2][1].classes__

---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
<ipython-input-125-7d45b007e86b> in <module>()
----> 1 pipelines['bow_MultinomialNB'].steps[2][1].classes_

AttributeError: 'MultinomialNB' object has no attribute 'classes_'


pipelines['bow_MultinomialNB'].steps[0][1].get_feature_names()
---------------------------------------------------------------------------
NotFittedError Traceback (most recent call last)
<ipython-input-126-2883929221d1> in <module>()
----> 1 pipelines['bow_MultinomialNB'].steps[0][1].get_feature_names()

~Anaconda3libsite-packagessklearnfeature_extractiontext.py in get_feature_names(self)
958 def get_feature_names(self):
959 """Array mapping from feature integer indices to feature name"""
--> 960 self._check_vocabulary()
961
962 return [t for t, i in sorted(six.iteritems(self.vocabulary_),

~Anaconda3libsite-packagessklearnfeature_extractiontext.py in _check_vocabulary(self)
301 """Check if vocabulary is empty or missing (not fit-ed)"""
302 msg = "%(name)s - Vocabulary wasn't fitted."
--> 303 check_is_fitted(self, 'vocabulary_', msg=msg),
304
305 if len(self.vocabulary_) == 0:

~Anaconda3libsite-packagessklearnutilsvalidation.py in check_is_fitted(estimator, attributes, msg, all_or_any)
766
767 if not all_or_any([hasattr(estimator, attr) for attr in attributes]):
--> 768 raise NotFittedError(msg % {'name': type(estimator).__name__})
769
770

NotFittedError: CountVectorizer - Vocabulary wasn't fitted.


x=pipelines['bow_MultinomialNB'].steps[0][1]._validate_vocabulary()
x.get_feature_names()

---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
<ipython-input-120-f620c754a34e> in <module>()
----> 1 x.get_feature_names()

AttributeError: 'NoneType' object has no attribute 'get_feature_names'


Regards,
Shree







scikit-learn pipeline feature-extraction naivebayes






share|improve this question















share|improve this question













share|improve this question




share|improve this question








edited Nov 12 at 2:18

























asked Nov 11 at 20:17









premgnc1983

42




42








  • 1




    Is there a reason you're looking at the pipelines object instead of the fitted model?
    – Jarad
    Nov 12 at 3:38










  • Either way it did not work. Actually I am saving each fitted model as per following code. fitted_models[name] = model. I am just interested in getting to work those error lines
    – premgnc1983
    Nov 12 at 12:46














  • 1




    Is there a reason you're looking at the pipelines object instead of the fitted model?
    – Jarad
    Nov 12 at 3:38










  • Either way it did not work. Actually I am saving each fitted model as per following code. fitted_models[name] = model. I am just interested in getting to work those error lines
    – premgnc1983
    Nov 12 at 12:46








1




1




Is there a reason you're looking at the pipelines object instead of the fitted model?
– Jarad
Nov 12 at 3:38




Is there a reason you're looking at the pipelines object instead of the fitted model?
– Jarad
Nov 12 at 3:38












Either way it did not work. Actually I am saving each fitted model as per following code. fitted_models[name] = model. I am just interested in getting to work those error lines
– premgnc1983
Nov 12 at 12:46




Either way it did not work. Actually I am saving each fitted model as per following code. fitted_models[name] = model. I am just interested in getting to work those error lines
– premgnc1983
Nov 12 at 12:46

















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