set marker to scale with y axis (with limits)












0















I want to scale my marker points with my y-axis values in matplotlib. I thought i could use "counts" from pandas to count the instances of each y-axis value, then set that range to the size values of my scatterplot, but the scale is all messed up and the marker points become huge (the range of y-axis values range from 1 to 17,000). What is a good way to scale this number back to something between 1 and 10?



import pandas as pd
import matplotlib.pyplot as plt

data = pd.read_excel("dataset.xlsx")

scale_range = pd.value_counts(data["y_axis"].values, sort = True))

plt.scatter(data["x_axis"], data["y_axis"], s = scale_range)
plt.axis([0, 120, 0, 1])

plt.show('dataset_out.png')


Any help is appreciated, thanks.










share|improve this question




















  • 2





    Divide by 1700?

    – busybear
    Nov 20 '18 at 19:52











  • lol yeah i gues i could find some percent to make the values in line to the scale i want. I was looking for a more "pythonic" way of doing it, Thanks though!

    – Dane Kania
    Nov 20 '18 at 19:54











  • I think that's a pretty "pythonic" method. It's straightforward at least. Another thing you might want to consider is size sets the area and not the diameter.

    – busybear
    Nov 20 '18 at 20:03













  • I wonder why that approach works at all. value_counts will produce a series of unique elements of its argument, which are generally less than the number of total elements. So either each value occurs exactly once, then you get all 1 in scale_range, or scale_range does not even have as many elements as x_axis, which might throw an error, or at least will give an incorrect plot. In that sense, why not use the y_axis values themselves? plt.scatter(data["x_axis"], data["y_axis"], s = data["y_axis"]+10)?

    – ImportanceOfBeingErnest
    Nov 20 '18 at 20:06













  • I tried your method and it doesnt scale at all. Im not really sure why, your method seems like a fine idea.

    – Dane Kania
    Nov 20 '18 at 20:25
















0















I want to scale my marker points with my y-axis values in matplotlib. I thought i could use "counts" from pandas to count the instances of each y-axis value, then set that range to the size values of my scatterplot, but the scale is all messed up and the marker points become huge (the range of y-axis values range from 1 to 17,000). What is a good way to scale this number back to something between 1 and 10?



import pandas as pd
import matplotlib.pyplot as plt

data = pd.read_excel("dataset.xlsx")

scale_range = pd.value_counts(data["y_axis"].values, sort = True))

plt.scatter(data["x_axis"], data["y_axis"], s = scale_range)
plt.axis([0, 120, 0, 1])

plt.show('dataset_out.png')


Any help is appreciated, thanks.










share|improve this question




















  • 2





    Divide by 1700?

    – busybear
    Nov 20 '18 at 19:52











  • lol yeah i gues i could find some percent to make the values in line to the scale i want. I was looking for a more "pythonic" way of doing it, Thanks though!

    – Dane Kania
    Nov 20 '18 at 19:54











  • I think that's a pretty "pythonic" method. It's straightforward at least. Another thing you might want to consider is size sets the area and not the diameter.

    – busybear
    Nov 20 '18 at 20:03













  • I wonder why that approach works at all. value_counts will produce a series of unique elements of its argument, which are generally less than the number of total elements. So either each value occurs exactly once, then you get all 1 in scale_range, or scale_range does not even have as many elements as x_axis, which might throw an error, or at least will give an incorrect plot. In that sense, why not use the y_axis values themselves? plt.scatter(data["x_axis"], data["y_axis"], s = data["y_axis"]+10)?

    – ImportanceOfBeingErnest
    Nov 20 '18 at 20:06













  • I tried your method and it doesnt scale at all. Im not really sure why, your method seems like a fine idea.

    – Dane Kania
    Nov 20 '18 at 20:25














0












0








0








I want to scale my marker points with my y-axis values in matplotlib. I thought i could use "counts" from pandas to count the instances of each y-axis value, then set that range to the size values of my scatterplot, but the scale is all messed up and the marker points become huge (the range of y-axis values range from 1 to 17,000). What is a good way to scale this number back to something between 1 and 10?



import pandas as pd
import matplotlib.pyplot as plt

data = pd.read_excel("dataset.xlsx")

scale_range = pd.value_counts(data["y_axis"].values, sort = True))

plt.scatter(data["x_axis"], data["y_axis"], s = scale_range)
plt.axis([0, 120, 0, 1])

plt.show('dataset_out.png')


Any help is appreciated, thanks.










share|improve this question
















I want to scale my marker points with my y-axis values in matplotlib. I thought i could use "counts" from pandas to count the instances of each y-axis value, then set that range to the size values of my scatterplot, but the scale is all messed up and the marker points become huge (the range of y-axis values range from 1 to 17,000). What is a good way to scale this number back to something between 1 and 10?



import pandas as pd
import matplotlib.pyplot as plt

data = pd.read_excel("dataset.xlsx")

scale_range = pd.value_counts(data["y_axis"].values, sort = True))

plt.scatter(data["x_axis"], data["y_axis"], s = scale_range)
plt.axis([0, 120, 0, 1])

plt.show('dataset_out.png')


Any help is appreciated, thanks.







python matplotlib






share|improve this question















share|improve this question













share|improve this question




share|improve this question








edited Nov 20 '18 at 19:52







Dane Kania

















asked Nov 20 '18 at 19:49









Dane KaniaDane Kania

256




256








  • 2





    Divide by 1700?

    – busybear
    Nov 20 '18 at 19:52











  • lol yeah i gues i could find some percent to make the values in line to the scale i want. I was looking for a more "pythonic" way of doing it, Thanks though!

    – Dane Kania
    Nov 20 '18 at 19:54











  • I think that's a pretty "pythonic" method. It's straightforward at least. Another thing you might want to consider is size sets the area and not the diameter.

    – busybear
    Nov 20 '18 at 20:03













  • I wonder why that approach works at all. value_counts will produce a series of unique elements of its argument, which are generally less than the number of total elements. So either each value occurs exactly once, then you get all 1 in scale_range, or scale_range does not even have as many elements as x_axis, which might throw an error, or at least will give an incorrect plot. In that sense, why not use the y_axis values themselves? plt.scatter(data["x_axis"], data["y_axis"], s = data["y_axis"]+10)?

    – ImportanceOfBeingErnest
    Nov 20 '18 at 20:06













  • I tried your method and it doesnt scale at all. Im not really sure why, your method seems like a fine idea.

    – Dane Kania
    Nov 20 '18 at 20:25














  • 2





    Divide by 1700?

    – busybear
    Nov 20 '18 at 19:52











  • lol yeah i gues i could find some percent to make the values in line to the scale i want. I was looking for a more "pythonic" way of doing it, Thanks though!

    – Dane Kania
    Nov 20 '18 at 19:54











  • I think that's a pretty "pythonic" method. It's straightforward at least. Another thing you might want to consider is size sets the area and not the diameter.

    – busybear
    Nov 20 '18 at 20:03













  • I wonder why that approach works at all. value_counts will produce a series of unique elements of its argument, which are generally less than the number of total elements. So either each value occurs exactly once, then you get all 1 in scale_range, or scale_range does not even have as many elements as x_axis, which might throw an error, or at least will give an incorrect plot. In that sense, why not use the y_axis values themselves? plt.scatter(data["x_axis"], data["y_axis"], s = data["y_axis"]+10)?

    – ImportanceOfBeingErnest
    Nov 20 '18 at 20:06













  • I tried your method and it doesnt scale at all. Im not really sure why, your method seems like a fine idea.

    – Dane Kania
    Nov 20 '18 at 20:25








2




2





Divide by 1700?

– busybear
Nov 20 '18 at 19:52





Divide by 1700?

– busybear
Nov 20 '18 at 19:52













lol yeah i gues i could find some percent to make the values in line to the scale i want. I was looking for a more "pythonic" way of doing it, Thanks though!

– Dane Kania
Nov 20 '18 at 19:54





lol yeah i gues i could find some percent to make the values in line to the scale i want. I was looking for a more "pythonic" way of doing it, Thanks though!

– Dane Kania
Nov 20 '18 at 19:54













I think that's a pretty "pythonic" method. It's straightforward at least. Another thing you might want to consider is size sets the area and not the diameter.

– busybear
Nov 20 '18 at 20:03







I think that's a pretty "pythonic" method. It's straightforward at least. Another thing you might want to consider is size sets the area and not the diameter.

– busybear
Nov 20 '18 at 20:03















I wonder why that approach works at all. value_counts will produce a series of unique elements of its argument, which are generally less than the number of total elements. So either each value occurs exactly once, then you get all 1 in scale_range, or scale_range does not even have as many elements as x_axis, which might throw an error, or at least will give an incorrect plot. In that sense, why not use the y_axis values themselves? plt.scatter(data["x_axis"], data["y_axis"], s = data["y_axis"]+10)?

– ImportanceOfBeingErnest
Nov 20 '18 at 20:06







I wonder why that approach works at all. value_counts will produce a series of unique elements of its argument, which are generally less than the number of total elements. So either each value occurs exactly once, then you get all 1 in scale_range, or scale_range does not even have as many elements as x_axis, which might throw an error, or at least will give an incorrect plot. In that sense, why not use the y_axis values themselves? plt.scatter(data["x_axis"], data["y_axis"], s = data["y_axis"]+10)?

– ImportanceOfBeingErnest
Nov 20 '18 at 20:06















I tried your method and it doesnt scale at all. Im not really sure why, your method seems like a fine idea.

– Dane Kania
Nov 20 '18 at 20:25





I tried your method and it doesnt scale at all. Im not really sure why, your method seems like a fine idea.

– Dane Kania
Nov 20 '18 at 20:25












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