couldn't run embedding network Keras with multiplue input












0















I have tried to run simple keras model with one embedding layer with 9 inputs. But I always get two errors, depending the layer after embedding.
I tried to use 2 different representations of data, but I get the same.
Now, what I have:



1.I'm using my own fit generator, which yeild data:



(list of shapes of input data) -
[(25,), (25,), (25,), (25, 24), (25, 11), (25, 10), (25, 28), (25, 8), (25, 7)]


features = [['id1',1], ['id2',1],
['id3',1], ['id4',24],
['id5',11], ['id6',10], ['id7',28], ['id8',8], ['id9',7]]

embeddings =
inputs =
for idx, feature in enumerate(features):
meta_input = Input(shape=(feature[1],), name = feature[0] + '_input')
sqrt = int(np.sqrt(feature[1]))

embedding = Embedding(feature[1], 1, input_length=1,name = feature[0] + '_embed')(meta_input)
fl = Flatten()(embedding)
embeddings.append(fl)
inputs.append(meta_input)

x = Concatenate()(embeddings)
dense_meta_1 = Dense(256, activation='relu')(x) #x
drop_meta = Dropout(0.2)(dense_meta_1)

dense_meta_2 = Dense(1)(drop_meta)


model = Model(inputs, dense_meta_2)

model.compile(optimizer='Adam', loss='mean_squared_error', metrics=
['mae'])
history = model.fit_generator(my_gen_v2(batch_size, batch_folder, steps), epochs=1, steps_per_epoch=steps,
max_queue_size=1)


so when I use flatten layers - I got this message (some part):




InvalidArgumentError: Matrix size-incompatible: In[0]: [25,91], In[1]: [9,256]
[[node dense_25/MatMul (defined at /home/human/anaconda3/lib/python3.6/site-packages/keras/backend/tensorflow_backend.py:1076) = MatMul[T=DT_FLOAT, _class=["loc:@training_7/Adam/gradients/dense_25/MatMul_grad/MatMul"], transpose_a=false, transpose_b=false, _device="/job:localhost/replica:0/task:0/device:GPU:0"](concatenate_16/concat, dense_25/kernel/read)]]
[[{{node metrics_11/mean_absolute_error/Mean_1/_1219}} = _Recvclient_terminated=false, recv_device="/job:localhost/replica:0/task:0/device:CPU:0", send_device="/job:localhost/replica:0/task:0/device:GPU:0", send_device_incarnation=1, tensor_name="edge_1116_metrics_11/mean_absolute_error/Mean_1", tensor_type=DT_FLOAT, _device="/job:localhost/replica:0/task:0/device:CPU:0"]]




but when I use Reshape layers:



embedding = Reshape(target_shape=(1,), name = feature[0] + '_reshape')(embedding)


I'v got this:




InvalidArgumentError: Input to reshape is a tensor with 600 values, but the requested shape has 25
[[node race_reshape/Reshape (defined at /home/human/anaconda3/lib/python3.6/site-packages/keras/backend/tensorflow_backend.py:1898) = Reshape[T=DT_FLOAT, Tshape=DT_INT32, _device="/job:localhost/replica:0/task:0/device:GPU:0"](race_embed_16/GatherV2, race_reshape/Reshape/shape)]]
[[{{node metrics_12/mean_absolute_error/Mean_1/_1417}} = _Recvclient_terminated=false, recv_device="/job:localhost/replica:0/task:0/device:CPU:0", send_device="/job:localhost/replica:0/task:0/device:GPU:0", send_device_incarnation=1, tensor_name="edge_1098_metrics_12/mean_absolute_error/Mean_1", tensor_type=DT_FLOAT, _device="/job:localhost/replica:0/task:0/device:CPU:0"]]




There are no simillar questions on stackoverflow, only about images shapes. Please help me resolve this, coz I spend a lot of time for this(










share|improve this question





























    0















    I have tried to run simple keras model with one embedding layer with 9 inputs. But I always get two errors, depending the layer after embedding.
    I tried to use 2 different representations of data, but I get the same.
    Now, what I have:



    1.I'm using my own fit generator, which yeild data:



    (list of shapes of input data) -
    [(25,), (25,), (25,), (25, 24), (25, 11), (25, 10), (25, 28), (25, 8), (25, 7)]


    features = [['id1',1], ['id2',1],
    ['id3',1], ['id4',24],
    ['id5',11], ['id6',10], ['id7',28], ['id8',8], ['id9',7]]

    embeddings =
    inputs =
    for idx, feature in enumerate(features):
    meta_input = Input(shape=(feature[1],), name = feature[0] + '_input')
    sqrt = int(np.sqrt(feature[1]))

    embedding = Embedding(feature[1], 1, input_length=1,name = feature[0] + '_embed')(meta_input)
    fl = Flatten()(embedding)
    embeddings.append(fl)
    inputs.append(meta_input)

    x = Concatenate()(embeddings)
    dense_meta_1 = Dense(256, activation='relu')(x) #x
    drop_meta = Dropout(0.2)(dense_meta_1)

    dense_meta_2 = Dense(1)(drop_meta)


    model = Model(inputs, dense_meta_2)

    model.compile(optimizer='Adam', loss='mean_squared_error', metrics=
    ['mae'])
    history = model.fit_generator(my_gen_v2(batch_size, batch_folder, steps), epochs=1, steps_per_epoch=steps,
    max_queue_size=1)


    so when I use flatten layers - I got this message (some part):




    InvalidArgumentError: Matrix size-incompatible: In[0]: [25,91], In[1]: [9,256]
    [[node dense_25/MatMul (defined at /home/human/anaconda3/lib/python3.6/site-packages/keras/backend/tensorflow_backend.py:1076) = MatMul[T=DT_FLOAT, _class=["loc:@training_7/Adam/gradients/dense_25/MatMul_grad/MatMul"], transpose_a=false, transpose_b=false, _device="/job:localhost/replica:0/task:0/device:GPU:0"](concatenate_16/concat, dense_25/kernel/read)]]
    [[{{node metrics_11/mean_absolute_error/Mean_1/_1219}} = _Recvclient_terminated=false, recv_device="/job:localhost/replica:0/task:0/device:CPU:0", send_device="/job:localhost/replica:0/task:0/device:GPU:0", send_device_incarnation=1, tensor_name="edge_1116_metrics_11/mean_absolute_error/Mean_1", tensor_type=DT_FLOAT, _device="/job:localhost/replica:0/task:0/device:CPU:0"]]




    but when I use Reshape layers:



    embedding = Reshape(target_shape=(1,), name = feature[0] + '_reshape')(embedding)


    I'v got this:




    InvalidArgumentError: Input to reshape is a tensor with 600 values, but the requested shape has 25
    [[node race_reshape/Reshape (defined at /home/human/anaconda3/lib/python3.6/site-packages/keras/backend/tensorflow_backend.py:1898) = Reshape[T=DT_FLOAT, Tshape=DT_INT32, _device="/job:localhost/replica:0/task:0/device:GPU:0"](race_embed_16/GatherV2, race_reshape/Reshape/shape)]]
    [[{{node metrics_12/mean_absolute_error/Mean_1/_1417}} = _Recvclient_terminated=false, recv_device="/job:localhost/replica:0/task:0/device:CPU:0", send_device="/job:localhost/replica:0/task:0/device:GPU:0", send_device_incarnation=1, tensor_name="edge_1098_metrics_12/mean_absolute_error/Mean_1", tensor_type=DT_FLOAT, _device="/job:localhost/replica:0/task:0/device:CPU:0"]]




    There are no simillar questions on stackoverflow, only about images shapes. Please help me resolve this, coz I spend a lot of time for this(










    share|improve this question



























      0












      0








      0








      I have tried to run simple keras model with one embedding layer with 9 inputs. But I always get two errors, depending the layer after embedding.
      I tried to use 2 different representations of data, but I get the same.
      Now, what I have:



      1.I'm using my own fit generator, which yeild data:



      (list of shapes of input data) -
      [(25,), (25,), (25,), (25, 24), (25, 11), (25, 10), (25, 28), (25, 8), (25, 7)]


      features = [['id1',1], ['id2',1],
      ['id3',1], ['id4',24],
      ['id5',11], ['id6',10], ['id7',28], ['id8',8], ['id9',7]]

      embeddings =
      inputs =
      for idx, feature in enumerate(features):
      meta_input = Input(shape=(feature[1],), name = feature[0] + '_input')
      sqrt = int(np.sqrt(feature[1]))

      embedding = Embedding(feature[1], 1, input_length=1,name = feature[0] + '_embed')(meta_input)
      fl = Flatten()(embedding)
      embeddings.append(fl)
      inputs.append(meta_input)

      x = Concatenate()(embeddings)
      dense_meta_1 = Dense(256, activation='relu')(x) #x
      drop_meta = Dropout(0.2)(dense_meta_1)

      dense_meta_2 = Dense(1)(drop_meta)


      model = Model(inputs, dense_meta_2)

      model.compile(optimizer='Adam', loss='mean_squared_error', metrics=
      ['mae'])
      history = model.fit_generator(my_gen_v2(batch_size, batch_folder, steps), epochs=1, steps_per_epoch=steps,
      max_queue_size=1)


      so when I use flatten layers - I got this message (some part):




      InvalidArgumentError: Matrix size-incompatible: In[0]: [25,91], In[1]: [9,256]
      [[node dense_25/MatMul (defined at /home/human/anaconda3/lib/python3.6/site-packages/keras/backend/tensorflow_backend.py:1076) = MatMul[T=DT_FLOAT, _class=["loc:@training_7/Adam/gradients/dense_25/MatMul_grad/MatMul"], transpose_a=false, transpose_b=false, _device="/job:localhost/replica:0/task:0/device:GPU:0"](concatenate_16/concat, dense_25/kernel/read)]]
      [[{{node metrics_11/mean_absolute_error/Mean_1/_1219}} = _Recvclient_terminated=false, recv_device="/job:localhost/replica:0/task:0/device:CPU:0", send_device="/job:localhost/replica:0/task:0/device:GPU:0", send_device_incarnation=1, tensor_name="edge_1116_metrics_11/mean_absolute_error/Mean_1", tensor_type=DT_FLOAT, _device="/job:localhost/replica:0/task:0/device:CPU:0"]]




      but when I use Reshape layers:



      embedding = Reshape(target_shape=(1,), name = feature[0] + '_reshape')(embedding)


      I'v got this:




      InvalidArgumentError: Input to reshape is a tensor with 600 values, but the requested shape has 25
      [[node race_reshape/Reshape (defined at /home/human/anaconda3/lib/python3.6/site-packages/keras/backend/tensorflow_backend.py:1898) = Reshape[T=DT_FLOAT, Tshape=DT_INT32, _device="/job:localhost/replica:0/task:0/device:GPU:0"](race_embed_16/GatherV2, race_reshape/Reshape/shape)]]
      [[{{node metrics_12/mean_absolute_error/Mean_1/_1417}} = _Recvclient_terminated=false, recv_device="/job:localhost/replica:0/task:0/device:CPU:0", send_device="/job:localhost/replica:0/task:0/device:GPU:0", send_device_incarnation=1, tensor_name="edge_1098_metrics_12/mean_absolute_error/Mean_1", tensor_type=DT_FLOAT, _device="/job:localhost/replica:0/task:0/device:CPU:0"]]




      There are no simillar questions on stackoverflow, only about images shapes. Please help me resolve this, coz I spend a lot of time for this(










      share|improve this question
















      I have tried to run simple keras model with one embedding layer with 9 inputs. But I always get two errors, depending the layer after embedding.
      I tried to use 2 different representations of data, but I get the same.
      Now, what I have:



      1.I'm using my own fit generator, which yeild data:



      (list of shapes of input data) -
      [(25,), (25,), (25,), (25, 24), (25, 11), (25, 10), (25, 28), (25, 8), (25, 7)]


      features = [['id1',1], ['id2',1],
      ['id3',1], ['id4',24],
      ['id5',11], ['id6',10], ['id7',28], ['id8',8], ['id9',7]]

      embeddings =
      inputs =
      for idx, feature in enumerate(features):
      meta_input = Input(shape=(feature[1],), name = feature[0] + '_input')
      sqrt = int(np.sqrt(feature[1]))

      embedding = Embedding(feature[1], 1, input_length=1,name = feature[0] + '_embed')(meta_input)
      fl = Flatten()(embedding)
      embeddings.append(fl)
      inputs.append(meta_input)

      x = Concatenate()(embeddings)
      dense_meta_1 = Dense(256, activation='relu')(x) #x
      drop_meta = Dropout(0.2)(dense_meta_1)

      dense_meta_2 = Dense(1)(drop_meta)


      model = Model(inputs, dense_meta_2)

      model.compile(optimizer='Adam', loss='mean_squared_error', metrics=
      ['mae'])
      history = model.fit_generator(my_gen_v2(batch_size, batch_folder, steps), epochs=1, steps_per_epoch=steps,
      max_queue_size=1)


      so when I use flatten layers - I got this message (some part):




      InvalidArgumentError: Matrix size-incompatible: In[0]: [25,91], In[1]: [9,256]
      [[node dense_25/MatMul (defined at /home/human/anaconda3/lib/python3.6/site-packages/keras/backend/tensorflow_backend.py:1076) = MatMul[T=DT_FLOAT, _class=["loc:@training_7/Adam/gradients/dense_25/MatMul_grad/MatMul"], transpose_a=false, transpose_b=false, _device="/job:localhost/replica:0/task:0/device:GPU:0"](concatenate_16/concat, dense_25/kernel/read)]]
      [[{{node metrics_11/mean_absolute_error/Mean_1/_1219}} = _Recvclient_terminated=false, recv_device="/job:localhost/replica:0/task:0/device:CPU:0", send_device="/job:localhost/replica:0/task:0/device:GPU:0", send_device_incarnation=1, tensor_name="edge_1116_metrics_11/mean_absolute_error/Mean_1", tensor_type=DT_FLOAT, _device="/job:localhost/replica:0/task:0/device:CPU:0"]]




      but when I use Reshape layers:



      embedding = Reshape(target_shape=(1,), name = feature[0] + '_reshape')(embedding)


      I'v got this:




      InvalidArgumentError: Input to reshape is a tensor with 600 values, but the requested shape has 25
      [[node race_reshape/Reshape (defined at /home/human/anaconda3/lib/python3.6/site-packages/keras/backend/tensorflow_backend.py:1898) = Reshape[T=DT_FLOAT, Tshape=DT_INT32, _device="/job:localhost/replica:0/task:0/device:GPU:0"](race_embed_16/GatherV2, race_reshape/Reshape/shape)]]
      [[{{node metrics_12/mean_absolute_error/Mean_1/_1417}} = _Recvclient_terminated=false, recv_device="/job:localhost/replica:0/task:0/device:CPU:0", send_device="/job:localhost/replica:0/task:0/device:GPU:0", send_device_incarnation=1, tensor_name="edge_1098_metrics_12/mean_absolute_error/Mean_1", tensor_type=DT_FLOAT, _device="/job:localhost/replica:0/task:0/device:CPU:0"]]




      There are no simillar questions on stackoverflow, only about images shapes. Please help me resolve this, coz I spend a lot of time for this(







      tensorflow keras






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      edited Nov 20 '18 at 10:15







      PonaFly

















      asked Nov 20 '18 at 10:08









      PonaFlyPonaFly

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          The problem was resolved by changing input_length in Embedding layer to input shape of feature (feature[1] in my example)






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            The problem was resolved by changing input_length in Embedding layer to input shape of feature (feature[1] in my example)






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              The problem was resolved by changing input_length in Embedding layer to input shape of feature (feature[1] in my example)






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                The problem was resolved by changing input_length in Embedding layer to input shape of feature (feature[1] in my example)






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                The problem was resolved by changing input_length in Embedding layer to input shape of feature (feature[1] in my example)







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                answered Nov 20 '18 at 13:30









                PonaFlyPonaFly

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