R and jupyter notebook installation problems











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  • am following instructions from
    https://irkernel.github.io/installation/ so i can use R with jupyter
    notebook.


  • i already have jupyter and R installed, and they work fine.


  • so when it comes to installing the packages with:


install.packages(c('repr', 'IRdisplay', 'evaluate', 'crayon', 'pbdZMQ', 'devtools', 'uuid', 'digest'))



i get this message:




In R CMD INSTALL
* installing source package 'repr' ...
** package 'repr' successfully unpacked and MD5 sums checked
Error in .read_description(dfile) :
file 'C:/Users/????/AppData/Local/Temp/RtmpCI01gk/R.INSTALL6e03e7f2fb2/repr/DESCRIPTION' does not exist
ERROR: installing package DESCRIPTION failed for package 'repr'
* removing 'C:/Program Files/R/R-3.5.1/library/repr'



The downloaded source packages are in
'C:Users????AppDataLocalTempRtmpY9TPCgdownloaded_packages'
Warning message:
In install.packages("repr") :
installation of package 'repr' had non-zero exit status
install.packages('devtools')
trying URL 'https://cran.usthb.dz/bin/windows/contrib/3.5/devtools_2.0.1.zip'
Content type 'application/zip' length 384476 bytes (375 KB)
downloaded 375 KB







python r jupyter-notebook







share|improve this question


























    up vote
    0
    down vote

    favorite













    • am following instructions from
      https://irkernel.github.io/installation/ so i can use R with jupyter
      notebook.


    • i already have jupyter and R installed, and they work fine.


    • so when it comes to installing the packages with:


    install.packages(c('repr', 'IRdisplay', 'evaluate', 'crayon', 'pbdZMQ', 'devtools', 'uuid', 'digest'))



    i get this message:




    In R CMD INSTALL
    * installing source package 'repr' ...
    ** package 'repr' successfully unpacked and MD5 sums checked
    Error in .read_description(dfile) :
    file 'C:/Users/????/AppData/Local/Temp/RtmpCI01gk/R.INSTALL6e03e7f2fb2/repr/DESCRIPTION' does not exist
    ERROR: installing package DESCRIPTION failed for package 'repr'
    * removing 'C:/Program Files/R/R-3.5.1/library/repr'



    The downloaded source packages are in
    'C:Users????AppDataLocalTempRtmpY9TPCgdownloaded_packages'
    Warning message:
    In install.packages("repr") :
    installation of package 'repr' had non-zero exit status
    install.packages('devtools')
    trying URL 'https://cran.usthb.dz/bin/windows/contrib/3.5/devtools_2.0.1.zip'
    Content type 'application/zip' length 384476 bytes (375 KB)
    downloaded 375 KB







    python r jupyter-notebook







    share|improve this question
























      up vote
      0
      down vote

      favorite









      up vote
      0
      down vote

      favorite












      • am following instructions from
        https://irkernel.github.io/installation/ so i can use R with jupyter
        notebook.


      • i already have jupyter and R installed, and they work fine.


      • so when it comes to installing the packages with:


      install.packages(c('repr', 'IRdisplay', 'evaluate', 'crayon', 'pbdZMQ', 'devtools', 'uuid', 'digest'))



      i get this message:




      In R CMD INSTALL
      * installing source package 'repr' ...
      ** package 'repr' successfully unpacked and MD5 sums checked
      Error in .read_description(dfile) :
      file 'C:/Users/????/AppData/Local/Temp/RtmpCI01gk/R.INSTALL6e03e7f2fb2/repr/DESCRIPTION' does not exist
      ERROR: installing package DESCRIPTION failed for package 'repr'
      * removing 'C:/Program Files/R/R-3.5.1/library/repr'



      The downloaded source packages are in
      'C:Users????AppDataLocalTempRtmpY9TPCgdownloaded_packages'
      Warning message:
      In install.packages("repr") :
      installation of package 'repr' had non-zero exit status
      install.packages('devtools')
      trying URL 'https://cran.usthb.dz/bin/windows/contrib/3.5/devtools_2.0.1.zip'
      Content type 'application/zip' length 384476 bytes (375 KB)
      downloaded 375 KB







      python r jupyter-notebook







      share|improve this question














      • am following instructions from
        https://irkernel.github.io/installation/ so i can use R with jupyter
        notebook.


      • i already have jupyter and R installed, and they work fine.


      • so when it comes to installing the packages with:


      install.packages(c('repr', 'IRdisplay', 'evaluate', 'crayon', 'pbdZMQ', 'devtools', 'uuid', 'digest'))



      i get this message:




      In R CMD INSTALL
      * installing source package 'repr' ...
      ** package 'repr' successfully unpacked and MD5 sums checked
      Error in .read_description(dfile) :
      file 'C:/Users/????/AppData/Local/Temp/RtmpCI01gk/R.INSTALL6e03e7f2fb2/repr/DESCRIPTION' does not exist
      ERROR: installing package DESCRIPTION failed for package 'repr'
      * removing 'C:/Program Files/R/R-3.5.1/library/repr'



      The downloaded source packages are in
      'C:Users????AppDataLocalTempRtmpY9TPCgdownloaded_packages'
      Warning message:
      In install.packages("repr") :
      installation of package 'repr' had non-zero exit status
      install.packages('devtools')
      trying URL 'https://cran.usthb.dz/bin/windows/contrib/3.5/devtools_2.0.1.zip'
      Content type 'application/zip' length 384476 bytes (375 KB)
      downloaded 375 KB







      python r jupyter-notebook




      python r jupyter-notebook






      share|improve this question













      share|improve this question











      share|improve this question




      share|improve this question










      asked Nov 10 at 14:31









      Mehdi Hadji

      53




      53
























          1 Answer
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          down vote













          Where are you running the install.packages command? If you are running that in Jupyter Notebook it will fail. Make sure that you don't do this in your RStudio console, but in a regular R terminal. See the blog post Jupyter And R Markdown: Notebooks With R from DataCamp.






          share|improve this answer





















          • yes thats what i did... in R terminal
            – Mehdi Hadji
            Nov 12 at 10:55










          • yes thats what i did... in R terminal
            – Mehdi Hadji
            Nov 12 at 10:56











          Your Answer






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          1 Answer
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          active

          oldest

          votes








          1 Answer
          1






          active

          oldest

          votes









          active

          oldest

          votes






          active

          oldest

          votes








          up vote
          0
          down vote













          Where are you running the install.packages command? If you are running that in Jupyter Notebook it will fail. Make sure that you don't do this in your RStudio console, but in a regular R terminal. See the blog post Jupyter And R Markdown: Notebooks With R from DataCamp.






          share|improve this answer





















          • yes thats what i did... in R terminal
            – Mehdi Hadji
            Nov 12 at 10:55










          • yes thats what i did... in R terminal
            – Mehdi Hadji
            Nov 12 at 10:56















          up vote
          0
          down vote













          Where are you running the install.packages command? If you are running that in Jupyter Notebook it will fail. Make sure that you don't do this in your RStudio console, but in a regular R terminal. See the blog post Jupyter And R Markdown: Notebooks With R from DataCamp.






          share|improve this answer





















          • yes thats what i did... in R terminal
            – Mehdi Hadji
            Nov 12 at 10:55










          • yes thats what i did... in R terminal
            – Mehdi Hadji
            Nov 12 at 10:56













          up vote
          0
          down vote










          up vote
          0
          down vote









          Where are you running the install.packages command? If you are running that in Jupyter Notebook it will fail. Make sure that you don't do this in your RStudio console, but in a regular R terminal. See the blog post Jupyter And R Markdown: Notebooks With R from DataCamp.






          share|improve this answer












          Where are you running the install.packages command? If you are running that in Jupyter Notebook it will fail. Make sure that you don't do this in your RStudio console, but in a regular R terminal. See the blog post Jupyter And R Markdown: Notebooks With R from DataCamp.







          share|improve this answer












          share|improve this answer



          share|improve this answer










          answered Nov 11 at 2:33









          Russell D

          1197




          1197












          • yes thats what i did... in R terminal
            – Mehdi Hadji
            Nov 12 at 10:55










          • yes thats what i did... in R terminal
            – Mehdi Hadji
            Nov 12 at 10:56


















          • yes thats what i did... in R terminal
            – Mehdi Hadji
            Nov 12 at 10:55










          • yes thats what i did... in R terminal
            – Mehdi Hadji
            Nov 12 at 10:56
















          yes thats what i did... in R terminal
          – Mehdi Hadji
          Nov 12 at 10:55




          yes thats what i did... in R terminal
          – Mehdi Hadji
          Nov 12 at 10:55












          yes thats what i did... in R terminal
          – Mehdi Hadji
          Nov 12 at 10:56




          yes thats what i did... in R terminal
          – Mehdi Hadji
          Nov 12 at 10:56


















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